remove drug response data points where one of the response values is NA

ymahlich · ymahlich · commit 21b342524233 · 2025-03-21T10:53:14.000-07:00
diff --git a/scripts/prepare_data_for_improve.py b/scripts/prepare_data_for_improve.py
@@ -178,7 +178,7 @@ def process_datasets(args):
                     'dss',
                 ],
             )
-            experiments.append(experiment)
+            experiments.append(experiment.dropna())
         else:
             logger.debug(f"NO experiment data for {data_set}")
 

Original file line number	Diff line number	Diff line change
`@@ -178,7 +178,7 @@ def process_datasets(args):`
`178`	`178`	`'dss',`
`179`	`179`	`],`
`180`	`180`	`)`
`181`		`- experiments.append(experiment)`
	`181`	`+ experiments.append(experiment.dropna())`
`182`	`182`	`else:`
`183`	`183`	`logger.debug(f"NO experiment data for {data_set}")`
`184`	`184`