ncil.yml

name: ncil
channels:
  - conda-forge
  - nodefaults
dependencies:
  - python
  - notebook
  - jupyterlab
  - numpy
  - conda-forge::blas=*=openblas
  - ipympl
  - ipywidgets
  - matplotlib-base
  - pandas
  - pandoc
  - Pillow
  - pytables
  - pyyaml
  - regex
  - scikit-image
  - scikit-learn
  - scipy
  - seaborn
  - statsmodels
  - pip
  - pydicom
  - dicom2nifti
  - dcm2bids
  - nodejs
  - nibabel
  - nilearn
  - opencv
  - mne>=1.8.0
  - mne-bids
  - mne-nirs
  - mne-lsl
  - mne-qt-browser
  - pyxdf
  - pybv
  # - mayavi
  # - pyvista
  - autoreject
  - python-picard
  # - h5io
  # - pymatreader
  - pyarrow
  - pingouin
  - r-base
  - r-essentials
  - r-arrow 
  - r-rjson
  - r-yaml
  - r-lme4 
  - r-mgcv
  - r-e1071
  - r-emmeans 
  - r-ggeffects
  - r-sjplot 
  - r-sjstats 
  - r-stargazer 
  - r-corrplot
  - pip:
    # - mnelab
    - rev_ai

  # nothing below here is probably needed
  # - r-brms
  # - r-car 
  # - r-devtools
  # - r-forecast
  # - r-ggthemes 
  # - r-hexbin
  # - r-htmltools
  # - r-htmlwidgets
  # - r-languageserver
  # - r-lattice 

  # - r-party 
  # - r-partykit 
  # - r-ranger
  # - r-rann
  # - r-rcurl
  # - r-reshape2 
  # - r-rmarkdown
  # - r-rodbc
  # - r-rsqlite
  # - r-see 
  # - r-viridis
  # - rpy2