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Merge branch 'main' of https://github.com/NHSDigital/NHSDigital-FHIR-Genomics-ImplementationGuide into Feature-IOPS-3020-WGS-Test-Order-Form-CancerSolidTumour
2 parents 6880b81 + 65effa4 commit 4dc7c8c

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35 files changed

+320
-377
lines changed

Bundle/Bundle-NonWGSTestOrderForm-CancerSolidTumor-Example.json

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"display": "Cancer - Non-WGS"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "relapse",
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"display": "Relapse"
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}
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]
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}
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],
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"priority": "routine",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-HazelSmithKingstonPathology-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "relapse",
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"display": "Relapse"
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}
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]
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}
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],
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"performer": [
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{
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"identifier": {

Bundle/Bundle-NonWGSTestOrderForm-Example.json

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"display": "Rare Disease - Non-WGS"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"priority": "routine",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-GeneSmithENT-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"supportingInfo": [
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{
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"reference": "Condition/Condition-MonogenicHearingLoss-Example"

Bundle/Bundle-NonWGSTestOrderForm-FetalScenario-Example.json

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"display": "Rare Disease - Non-WGS"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "staging-or-prognosis",
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"display": "Staging or Prognosis"
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}
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]
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}
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],
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"priority": "urgent",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-LoisLaneKingstonClinicalGenetics-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "staging-or-prognosis",
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"display": "Staging or Prognosis"
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}
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]
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}
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],
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"supportingInfo": [
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{
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"reference": "Observation/Observation-HistoryOfFetalLoss-Example"

Bundle/Bundle-NonWGSTestOrderForm-Reanalysis-Example.json

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"code": "rare-disease-non-wgs"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "new-treatment-clinical-management",
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"display": "New Treatment/Clinical Management"
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}
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],
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"text": "Significant new treatment and or clinical management implication for the patient.Please provide details/treatment for management of epilepsy"
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}
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],
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"priority": "routine",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-HazelSmithRenal-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "new-treatment-clinical-management",
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"display": "New Treatment/Clinical Management"
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}
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],
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"text": "Significant new treatment and or clinical management implication for the patient.Please provide details/treatment for management of epilepsy"
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}
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],
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"supportingInfo": [
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{
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"reference": "Observation/Observation-GenomicEthnicity-Example"

Bundle/Bundle-NonWGSTestOrderFormUpdated-FetalScenario-Example.json

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"display": "Rare Disease - Non-WGS"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "staging-or-prognosis",
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"display": "Staging or Prognosis"
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}
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]
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}
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],
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"priority": "urgent",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-LoisLaneKingstonClinicalGenetics-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "staging-or-prognosis",
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"display": "Staging or Prognosis"
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}
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]
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}
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],
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"supportingInfo": [
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{
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"reference": "Observation/Observation-HistoryOfFetalLoss-Example"

Bundle/Bundle-TransactionResponseSuccess-Example.json

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"display": "Rare Disease - Non-WGS"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"priority": "routine",
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"requester": {
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"reference": "PractitionerRole/bbc46b47-42eb-41e5-bee4-efb2d3154254"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"note": [
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{
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"text": "No family history of genomic testing"

Bundle/Bundle-WGSTestOrderForm-Example.json

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"display": "Rare Disease - WGS"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"priority": "routine",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-HazelSmithRenal-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"supportingInfo": [
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{
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"reference": "Condition/Condition-MonogenicHearingLoss-Example"

CodeSystem/CodeSystem-Genomics-reason-for-testing.json

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]
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}
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],
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"description": "A set of codes use to identify the reason for requesting a genomics test.This is intended to be used on ServiceRequest.reasonCode.",
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"description": "A set of codes use to identify the reason for requesting a genomics test.This is intended to be used on ServiceRequest.category.",
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"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.",
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"caseSensitive": true,
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"content": "complete",

ServiceRequest/ServiceRequest-NonWGSTestOrder-VariantReinterpretation-Example.json

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"code": "rare-disease-non-wgs"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"priority": "routine",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-GeneSmith-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"supportingInfo": [
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{
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"reference": "Observation/Observation-GenomicEthnicity-Example"

ServiceRequest/ServiceRequest-NonWGSTestOrderForm-Cancellation-Example.json

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"display": "Rare Disease - Non-WGS"
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}
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]
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},
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"priority": "routine",
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"requester": {
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"reference": "PractitionerRole/PractitionerRole-GeneSmithENT-Example"
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},
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"reasonCode": [
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{
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"coding": [
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{
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"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
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"code": "diagnostic",
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"display": "Diagnostic"
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}
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]
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}
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],
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"supportingInfo": [
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{
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"reference": "Observation/Observation-GenomicEthnicity-Example"

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