pull

Merge branch 'fixes-for-HCA' of https://github.com/MangiolaLaboratory/sccomp into fixes-for-HCA

# Conflicts:
#	LICENSE
#	R/utilities.R

Author: stemangiola

LICENSE

@@ -678,3 +678,4 @@ Public License instead of this License.  But first, please read
 YEAR: 2024
 COPYRIGHT HOLDER: sccomp authors
 
+

R/utilities.R

@@ -1319,7 +1319,6 @@ data_spread_to_model_input =
       y_proportion = y[0,,drop = FALSE]
     }
 
-
     data_for_model =
       list(
         N = .data_spread %>% nrow(),
@@ -2636,7 +2635,6 @@ get_abundance_contrast_draws = function(.data, contrasts){
     draws = tibble()
 
 
-
   # Abundance
   draws = draws |> select(-.variable)
 
@@ -2939,7 +2937,6 @@ get_variability_contrast_draws = function(.data, contrasts){
     draws |>  
     pivot_wider(names_from = C, values_from = .value) %>%
     setNames(colnames(.)[1:5] |> c(variability_factor_of_interest)) |>
-
     select( -.variable) 
 
   # If I have constrasts calculate