Skip to content

Commit 1f3e836

Browse files
author
haesleinhuepf
committed
added docs for clEsperanto (experimental)
1 parent cda6312 commit 1f3e836

File tree

506 files changed

+3565
-1580
lines changed

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

506 files changed

+3565
-1580
lines changed

images/mini_cle_logo.png

904 Bytes
Loading

reference.md

+460-456
Large diffs are not rendered by default.

reference_StartContinuousWebcamAcquisition.md

+1-1
Original file line numberDiff line numberDiff line change
@@ -1,5 +1,5 @@
11
## startContinuousWebcamAcquisition
2-
<img src="images/mini_empty_logo.png"/><img src="images/mini_empty_logo.png"/><img src="images/mini_clijx_logo.png"/>
2+
<img src="images/mini_empty_logo.png"/><img src="images/mini_empty_logo.png"/><img src="images/mini_clijx_logo.png"/><img src="images/mini_empty_logo.png"/>
33

44
Starts acquistion of images from a webcam.
55

reference__binary.md

+92-91
Large diffs are not rendered by default.

reference__detection.md

+14-13
Original file line numberDiff line numberDiff line change
@@ -6,6 +6,7 @@ __Please note:__ CLIJ is deprecated. [Make the transition to CLIJ2](https://clij
66
<img src="images/mini_clij1_logo.png" width="18" height="18"/> Method is available in CLIJ (deprecated release)
77
<img src="images/mini_clij2_logo.png" width="18" height="18"/> Method is available in CLIJ2 (stable release)
88
<img src="images/mini_clijx_logo.png" width="18" height="18"/> Method is available in CLIJx (experimental release)
9+
<img src="images/mini_cle_logo.png" width="18" height="18"/> Method is available in clEsperanto (experimental)
910

1011

1112

@@ -16,54 +17,54 @@ __Categories:__ [Binary](https://clij.github.io/clij2-docs/reference__binary), [
1617
<a name="B"></a>
1718

1819
## B
19-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_binaryEdgeDetection">binaryEdgeDetection</a>
20+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_cle_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_binaryEdgeDetection">binaryEdgeDetection</a>
2021
Determines pixels/voxels which are on the surface of binary objects and sets only them to 1 in the destination image. All other pixels are set to 0.
2122

2223
<a name="D"></a>
2324

2425
## D
25-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectAndLabelMaxima">detectAndLabelMaxima (Experimental)</a>
26+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectAndLabelMaxima">detectAndLabelMaxima (Experimental)</a>
2627
Determines maximum regions in a Gaussian blurred version of the original image.
2728

28-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectLabelEdges">detectLabelEdges</a>
29+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectLabelEdges">detectLabelEdges</a>
2930
Takes a labelmap and returns an image where all pixels on label edges are set to 1 and all other pixels to 0.
3031

31-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMaxima2DBox">detectMaxima2DBox</a>
32+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_cle_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMaxima2DBox">detectMaxima2DBox</a>
3233
Detects local maxima in a given square/cubic neighborhood.
3334

34-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMaxima3DBox">detectMaxima3DBox</a>
35+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_cle_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMaxima3DBox">detectMaxima3DBox</a>
3536
Detects local maxima in a given square/cubic neighborhood.
3637

37-
### <img src="images/mini_clij1_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMaximaSliceBySliceBox">detectMaximaSliceBySliceBox</a>
38+
### <img src="images/mini_clij1_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMaximaSliceBySliceBox">detectMaximaSliceBySliceBox</a>
3839
Detects local maxima in a given square neighborhood of an input image stack.
3940

40-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMinima2DBox">detectMinima2DBox</a>
41+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMinima2DBox">detectMinima2DBox</a>
4142
Detects local minima in a given square/cubic neighborhood.
4243

43-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMinima3DBox">detectMinima3DBox</a>
44+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMinima3DBox">detectMinima3DBox</a>
4445
Detects local minima in a given square/cubic neighborhood.
4546

46-
### <img src="images/mini_clij1_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMinimaSliceBySliceBox">detectMinimaSliceBySliceBox</a>
47+
### <img src="images/mini_clij1_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_detectMinimaSliceBySliceBox">detectMinimaSliceBySliceBox</a>
4748
Detects local minima in a given square neighborhood of an input image stack.
4849

4950
<a name="F"></a>
5051

5152
## F
52-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_findAndLabelMaxima">findAndLabelMaxima (Experimental)</a>
53+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_findAndLabelMaxima">findAndLabelMaxima (Experimental)</a>
5354
Determine maxima with a given tolerance to surrounding maxima and background and label them.
5455

55-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_findMaxima">findMaxima (Experimental)</a>
56+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_findMaxima">findMaxima (Experimental)</a>
5657
Finds and labels local maxima with neighboring maxima and background above a given tolerance threshold.
5758

5859
<a name="L"></a>
5960

6061
## L
61-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_labelSpots">labelSpots</a>
62+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_labelSpots">labelSpots</a>
6263
Transforms a binary image with single pixles set to 1 to a labelled spots image.
6364

6465
<a name="S"></a>
6566

6667
## S
67-
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_spotsToPointList">spotsToPointList</a>
68+
### <img src="images/mini_empty_logo.png" width="18" height="18"/><img src="images/mini_clij2_logo.png" width="18" height="18"/><img src="images/mini_clijx_logo.png" width="18" height="18"/><img src="images/mini_empty_logo.png" width="18" height="18"/><a href="https://clij.github.io/clij2-docs/reference_spotsToPointList">spotsToPointList</a>
6869
Transforms a spots image as resulting from maximum/minimum detection in an image where every column contains d pixels (with d = dimensionality of the original image) with the coordinates of the maxima/minima.
6970

0 commit comments

Comments
 (0)