DESCRIPTION

Package: SmCCNet
Title: Sparse Multiple Canonical Correlation Network Analysis Tool
Version: 2.0.3
Date: 2024-1-13
Author: 
    Weixuan Liu [aut, cre],
    Yonghua Zhuang [aut, cre],
    W. Jenny Shi [aut, cre],
    Thao Vu [aut],
    Iain Konigsberg [aut],
    Katherine Pratte [aut],
    Laura Saba [aut],
    Katerina Kechris [aut]
Maintainer: 
    Weixuan Liu <weixuan.liu@cuanschutz.edu>
Description: 
   A canonical correlation based framework (SmCCNet) designed for the construction of phenotype-specific multi-omics networks. This framework adeptly integrates single or multiple omics data types along with a quantitative or binary phenotype of interest. It offers a streamlined setup process that can be tailored manually or configured automatically, ensuring a flexible and user-friendly experience.
URL: https://github.com/KechrisLab/SmCCNet,
    https://kechrislab.github.io/SmCCNet/,
    https://liux4283.github.io/SmCCNet/
Depends: R (>= 3.5)
Imports: 
    EnvStats,
    future,
    pROC,
    spls,
    Matrix,
    pbapply,
    igraph,
    magrittr,
    rlist,
    furrr,
    purrr,
    pracma
License: GPL-3
Encoding: UTF-8
LazyData: true
biocViews: Network
RoxygenNote: 7.2.3
NeedsCompilation: no
VignetteBuilder: knitr
Packaged: 2024-01-13 15:16:50 UTC; Weixuan Liu
Repository: CRAN
Date/Publication: 2024-01-13 15:16:50 UTC
Suggests: 
    knitr,
    rmarkdown,
    testthat (>= 3.0.0),
    dplyr,
    reshape2,
    shadowtext,
    tidyverse,
    parallel,
    mltools,
    caret, 
Config/testthat/edition: 3