Visualization for TSS comparison

2. Ideas for visualization:

Graph with intensity value:

• can be taken directly from the .wig file
• Issue:
  • Might not be helpful visually if the amount of bases is too big

Graph with intensity value (histogram):

• vertical lines indicate TSSs
• bins might visualize TSSs better from a user perspective
• Issues:
  • How to scale the graph? What if the user wants to look at say a 1000 bases at time? -> Zooming in and out cant change the number of bins too much because then we would end up with the graph above
    -> instead more values should make up one bin the more zoomed out the graph is

Venn diagram:

our TSS comparison vs. TSSpredator Graph:

• Graph with complete sequence and TSSs of TSSpredator and our TSSs in different colors for direct comparison