Merge branch 'develop' into fix_CVE-2025-2926

Author: bmribler

.github/workflows/README.md

@@ -6,12 +6,12 @@ There are a few that only get triggered manually.
 ## Scheduled Workflows
 - daily-schedule.yml executes the daily-build.yml which first checks that there are changes
     * tarball.yml to create a source.zip and source.tar.gz
-    * cygwin-cmake.yml to test on cygwin
-    * cmake-script.yml to test and report to my.cdash
-    * cmake-par-script.yml to test with released MPI and report to my.cdash
-    * cmake-par-source.yml to test with MPI default branch and report to my.cdash
-    * cmake-analysis.yml to test with LEAK and ADDRESS sanitizers and report to my.cdash
-    * cmake-ctest.yml to create signed binaries with commit hash in the name
+    * cygwin.yml to test on cygwin
+    * script.yml to test and report to my.cdash
+    * par-script.yml to test with released MPI and report to my.cdash
+    * par-source.yml to test with MPI default branch and report to my.cdash
+    * analysis.yml to test with LEAK and ADDRESS sanitizers and report to my.cdash
+    * ctest.yml to create signed binaries with commit hash in the name
     * abi-report.yml to compare ABI to the last released binaries
     * release-files.yml uploads new binaries to snapshots
     * remove-files.yml remove previous binaries
@@ -33,21 +33,21 @@ There are a few that only get triggered manually.
 - publish-release.yml publishes release binaries to the support.hdfgroup bucket
 - release.yml creates binaries for an official release or snapshot
     * tarball.yml to create a source.zip and source.tar.gz
-    * cmake-ctest.yml to create signed binaries
+    * ctest.yml to create signed binaries
     * abi-report.yml to compare ABI to last released binaries
     * release-files.yml uploads new binaries to releases page
 
 ## Triggered Workflows
 - clang-format-check.yml runs clang-format and reports issues
-- cmake.yml
+- call-workflows.yml
 - codespell.yml checks spelling
 - cve.yml executes test_hdf5_cve.sh script
 - hdfeos5.yml configures and builds HDF5 then tests HDF-EOS5
 - linkchecker.yml verifies the links in generated doxygen files
 - netcdf.yml configures and builds HDF5 then tests NetCDF
 
-## Workflows called by cmake.yml
-- main-cmake-spc.yml configure, build, and test HDF5 with:
+## Workflows called by call-workflows.yml
+- main-spc.yml configure, build, and test HDF5 with:
     * API default v1_6
     * API default v1_8
     * API default v1_10
@@ -59,16 +59,16 @@ There are a few that only get triggered manually.
     * using no filters
     * in debug mode and -Werror compiler option
     * in release mode and -Werror compiler option
-    * with minimum cmake Version 3.18
-- main-cmake.yml configure, build, test, and package HDF5 on Ubuntu, macOS, and Windows
-- cmake-bintest.yml test binary packages created by main-cmake.yml
-- main-cmake-par.yml configure, build, and test HDF5 with openmpi
-- main-cmake-par-spc.yml configure, build, and test HDF5 with HDF5_ENABLE_WARNINGS_AS_ERRORS=ON
-- intel-cmake.yml configure, build, and test HDF5 with Intel OneAPI on Linux and Windows
-- nvhpc-cmake.yml configure, build, and test HDF5 with nvhpc
-- aocc-cmake.yml configure, build, and test HDF5 with AOCC and OpenMPI
-- testxpr-cmake.yml configure, build, and test HDF5 with HDF_TEST_EXPRESS=0
-- julia-cmake.yml configure and build HDF5, then test Julia hdf5 source
-- msys2-cmake.yml configure, build, and test HDF5 on mingw32, mingw64, ucrt64, clang64
-- i386-cmake.yml configure, build, and test HDF5 on 32-bit Linux
+    * with minimum CMake Version 3.18
+- main.yml configure, build, test, and package HDF5 on Ubuntu, macOS, and Windows
+- bintest.yml test binary packages created by main.yml
+- main-par.yml configure, build, and test HDF5 with openmpi
+- main-par-spc.yml configure, build, and test HDF5 with HDF5_ENABLE_WARNINGS_AS_ERRORS=ON
+- intel.yml configure, build, and test HDF5 with Intel OneAPI on Linux and Windows
+- nvhpc.yml configure, build, and test HDF5 with nvhpc
+- aocc.yml configure, build, and test HDF5 with AOCC and OpenMPI
+- testxpr.yml configure, build, and test HDF5 with HDF_TEST_EXPRESS=0
+- julia.yml configure and build HDF5, then test Julia hdf5 source
+- msys2.yml configure, build, and test HDF5 on mingw32, mingw64, ucrt64, clang64
+- i386.yml configure, build, and test HDF5 on 32-bit Linux
 

.github/workflows/cmake-analysis.yml renamed to .github/workflows/analysis.yml

@@ -1,4 +1,4 @@
-name: hdf5 dev ctest analysis runs
+name: hdf5 dev CTest analysis runs
 
 # Triggers the workflow on a call from another workflow
 on:
@@ -29,7 +29,7 @@ jobs:
     name: "Ubuntu GCC Coverage"
     runs-on: ubuntu-22.04
     steps:
-    - name: Install CMake Dependencies (Linux_coverage)
+    - name: Install Dependencies (Linux_coverage)
       run: |
         sudo apt update
         sudo apt-get install ninja-build doxygen graphviz curl build-essential
@@ -104,14 +104,14 @@ jobs:
             set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=OFF")
             set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_NO_PACKAGES:BOOL=ON")
 
-    - name: Run ctest (Linux_coverage)
+    - name: Run CTest (Linux_coverage)
       run: |
         cd "${{ runner.workspace }}/hdf5"
         ctest -S HDF5config.cmake,CTEST_SITE_EXT=${{ github.event.repository.full_name }}_COV,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Debug -VV -O hdf5.log
       shell: bash
       continue-on-error: true
 
-    # Save log files created by ctest script
+    # Save log files created by CTest script
     - name: Save log (Linux_coverage)
       uses: actions/upload-artifact@v4
       with:
@@ -125,7 +125,7 @@ jobs:
     name: "Ubuntu Clang LeakSanitizer"
     runs-on: ubuntu-22.04
     steps:
-      - name: Install CMake Dependencies (Linux_Leak)
+      - name: Install Dependencies (Linux_Leak)
         run: |
           sudo apt update
           sudo apt-get install ninja-build doxygen graphviz curl libtinfo5
@@ -205,14 +205,14 @@ jobs:
               set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_USE_LOCALCONTENT:BOOL=OFF")
               set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DPLUGIN_USE_LOCALCONTENT:BOOL=OFF")
 
-      - name: Run ctest (Linux_Leak)
+      - name: Run CTest (Linux_Leak)
         run: |
           cd "${{ runner.workspace }}/hdf5"
           ctest -S HDF5config.cmake,CTEST_SITE_EXT=${{ github.event.repository.full_name }}-LEAK,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Debug -VV -O hdf5.log
         shell: bash
         continue-on-error: true
 
-      # Save log files created by ctest script
+      # Save log files created by CTest script
       - name: Save log (Linux_Leak)
         uses: actions/upload-artifact@v4
         with:
@@ -226,7 +226,7 @@ jobs:
     name: "Ubuntu Clang AddressSanitizer"
     runs-on: ubuntu-22.04
     steps:
-      - name: Install CMake Dependencies (Linux_Address)
+      - name: Install Dependencies (Linux_Address)
         run: |
           sudo apt update
           sudo apt-get install ninja-build doxygen graphviz curl libtinfo5
@@ -306,14 +306,14 @@ jobs:
               set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_USE_LOCALCONTENT:BOOL=OFF")
               set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DPLUGIN_USE_LOCALCONTENT:BOOL=OFF")
 
-      - name: Run ctest (Linux_Address)
+      - name: Run CTest (Linux_Address)
         run: |
           cd "${{ runner.workspace }}/hdf5"
           ctest -S HDF5config.cmake,CTEST_SITE_EXT=${{ github.event.repository.full_name }}-ADDR,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Debug -VV -O hdf5.log
         shell: bash
         continue-on-error: true
 
-      # Save log files created by ctest script
+      # Save log files created by CTest script
       - name: Save log (Linux_Address)
         uses: actions/upload-artifact@v4
         with:
@@ -327,7 +327,7 @@ jobs:
     name: "Ubuntu Clang UndefinedBehaviorSanitizer"
     runs-on: ubuntu-22.04
     steps:
-      - name: Install CMake Dependencies (Linux_UndefinedBehavior)
+      - name: Install Dependencies (Linux_UndefinedBehavior)
         run: |
           sudo apt update
           sudo apt-get install ninja-build doxygen graphviz curl libtinfo5
@@ -407,14 +407,14 @@ jobs:
               set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_USE_LOCALCONTENT:BOOL=OFF")
               set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DPLUGIN_USE_LOCALCONTENT:BOOL=OFF")
 
-      - name: Run ctest (Linux_UndefinedBehavior)
+      - name: Run CTest (Linux_UndefinedBehavior)
         run: |
           cd "${{ runner.workspace }}/hdf5"
           ctest -S HDF5config.cmake,CTEST_SITE_EXT=${{ github.event.repository.full_name }}-UNDEF,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Debug -VV -O hdf5.log
         shell: bash
         continue-on-error: true
 
-      # Save log files created by ctest script
+      # Save log files created by CTest script
       - name: Save log (Linux_UndefinedBehavior)
         uses: actions/upload-artifact@v4
         with:

.github/workflows/aocc-cmake.yml renamed to .github/workflows/aocc.yml

@@ -1,4 +1,4 @@
-name: hdf5 dev PAR CMake aocc ompi
+name: hdf5 dev PAR aocc ompi
 
 # Triggers the workflow on a call from another workflow
 on:
@@ -65,7 +65,7 @@ jobs:
           make
           make install
 
-      - name: CMake Configure
+      - name: Configure
         shell: bash
         run: |
           export LD_LIBRARY_PATH=/home/runner/work/hdf5/hdf5/aocc-compiler-${{ env.AOCCVERDOT }}/lib:/home/runner/work/hdf5/hdf5/openmpi-${{ env.MPIVERDOT }}-install/lib:/usr/local/lib
@@ -88,19 +88,19 @@ jobs:
           $GITHUB_WORKSPACE
           #cat src/libhdf5.settings
 
-      - name: CMake Build
+      - name: Build
         shell: bash
         run: |
           cmake --build . --parallel 3 --config ${{ inputs.build_mode }}
         working-directory: ${{ runner.workspace }}/build
 
-      - name: CMake Run Tests
+      - name: Run Tests
         shell: bash
         run: |
           ctest . -E MPI_TEST --parallel 2 -C ${{ inputs.build_mode }} -V
         working-directory: ${{ runner.workspace }}/build
 
-      - name: CMake Run Parallel Tests
+      - name: Run Parallel Tests
         shell: bash
         run: |
           ctest . -R MPI_TEST -E "_by_chunk|_by_pattern" -C ${{ inputs.build_mode }} -V