DaVinci/NAMESPACE at main · FunctionLab/DaVinci · GitHub

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# Generated by roxygen2: do not edit by hand

export(AutoTune)
export(BiModalIntegration)
export(CM)
export(CM.NMI)
export(Cluster.Finetune.pre)
export(ClusterMetric)
export(ClusterPlot)
export(ClusterPlot_fast)
export(ClusterPlot_label)
export(Cluster_2Dplot)
export(Differential.Analysis)
export(GSEA)
export(Horizontal.Integration)
export(Horizontal.Integration.Assemble)
export(LSI_normalization)
export(L_generate)
export(LvPlot)
export(LvPlot_fast)
export(Niche.report)
export(Niche.report.finetune)
export(Proximity.Dependency)
export(Proximity.Dependency.scatter)
export(VarianceExplained)
export(Vertical.Integration.Assemble)
export(colorPalette)
export(eigenMapMatMult)
export(enrich_visual)
export(flr)
export(flr.batch)
export(gene_normalization)
export(impact_adaptive)
export(leiden_adaptive)
export(manifoldDecomp)
export(manifoldDecomp.scalable)
export(manifoldDecomp_adaptive)
export(moranI)
export(moranI_all)
export(p.concatenate)
export(preprocess)
export(pseudo.default)
export(rcpp_shur)
export(reciprocal_deco)
export(reciprocal_with_Z)
export(refinement.batch)
export(same_size_clustering)
export(scatter.DiscretePlot)
export(scatter.DiscretePlot.list)
export(scatter.FeaturePlot)
export(scatter.FeaturePlot.list)
export(self_deco)
export(swk)
export(sylvester_pre)
export(tile_the_slice)
import(BiocNeighbors)
import(dendextend)
import(ggpubr)
import(harmony)
import(mclust)
import(sf)
import(tripack)
importFrom(methods,as)
importFrom(rsvd,rsvd)
importFrom(stats,as.dist)
importFrom(stats,cor)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,kmeans)
importFrom(stats,median)
importFrom(stats,p.adjust)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stats,wilcox.test)
importFrom(utils,head)
importFrom(utils,packageVersion)
useDynLib(DaVinci, .registration=TRUE)