forked from BioinformaticsArchive/blasr
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathmeson.build
146 lines (121 loc) · 3.5 KB
/
meson.build
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
project(
'blasr',
'cpp',
version : '5.3.2',
default_options : [
'buildtype=release',
'warning_level=3',
'cpp_std=c++11',
'b_ndebug=false'],
license : 'BSD-3',
meson_version : '>= 0.46.0')
# TODO:
# try to reenable 'b_ndebug=true'
# this will require replacing a number of asserts
# with proper throw statements
############
# CXXFLAGS #
############
blasr_warning_flags = []
cpp = meson.get_compiler('cpp')
foreach cflag: [
'-Wno-delete-non-virtual-dtor',
'-Wno-non-virtual-dtor',
'-Wno-unused-but-set-variable',
'-Wno-unused-variable']
if cpp.has_argument(cflag)
blasr_warning_flags += cflag
endif
endforeach
if cpp.get_id() == 'clang'
foreach cflag: [
'-Wno-overloaded-virtual']
if cpp.has_argument(cflag)
blasr_warning_flags += cflag
endif
endforeach
endif
################
# dependencies #
################
# threads
blasr_thread_dep = dependency('threads', required : true)
# boost
blasr_boost_dep = dependency('boost', required : true)
# pbbam
blasr_pbbam_dep = dependency('pbbam', fallback : ['pbbam', 'pbbam_dep'])
# libblasr
blasr_libblasr_dep = dependency('libblasr', fallback : ['blasr_libcpp', 'libblasr_dep'])
# zlib
blasr_zlib_dep = dependency('zlib', required : true)
blasr_deps = [blasr_thread_dep, blasr_boost_dep, blasr_pbbam_dep, blasr_libblasr_dep, blasr_zlib_dep]
########################
# sources + executable #
########################
# replace version strings
blasr_ver_arr = meson.project_version().split('.')
blasr_major_version = blasr_ver_arr[0]
blasr_minor_version = blasr_ver_arr[1]
blasr_patch_version = blasr_ver_arr[2]
blasr_config = configuration_data()
blasr_config.set('BLASR_VERSION', meson.project_version())
blasr_config.set('BLASR_VERSION_MAJOR', blasr_major_version)
blasr_config.set('BLASR_VERSION_MINOR', blasr_minor_version)
blasr_config.set('BLASR_VERSION_PATCH', blasr_patch_version)
blasr_BlasrVersion_h = configure_file(
input : 'BlasrVersion.h.in',
output : 'BlasrVersion.h',
configuration : blasr_config)
# replace git commit id
blasr_BlasrGitHash_h = vcs_tag(
input : 'BlasrGitHash.h.in',
output : 'BlasrGitHash.h',
command : ['git', 'describe', '--always', '--dirty=*'],
fallback : '',
replace_string : '@BLASR_GIT_SHA1@')
blasr_sources = []
blasr_include_directories = [include_directories('.')]
subdir('extrautils')
subdir('utils')
blasr_static_impl = static_library(
'blasr_impl',
blasr_sources,
install : false,
dependencies : blasr_deps,
cpp_args : [blasr_warning_flags, '-DUSE_PBBAM=1'])
blasr_main = executable(
'blasr', [
blasr_BlasrGitHash_h,
blasr_BlasrVersion_h,
files('Blasr.cpp')],
install : true,
dependencies : blasr_deps,
link_with : blasr_static_impl,
cpp_args : [blasr_warning_flags, '-DUSE_PBBAM=1', '-DCMAKE_BUILD=1'])
blasr_utils_sawriter = executable(
'sawriter', files([
'utils/SAWriter.cpp']),
install : true,
dependencies : blasr_deps,
link_with : blasr_static_impl,
cpp_args : [blasr_warning_flags, '-DUSE_PBBAM=1', '-DCMAKE_BUILD=1'])
blasr_utils_toAfg = executable(
'toAfg', files([
'utils/ToAfg.cpp']),
install : false,
dependencies : blasr_deps,
link_with : blasr_static_impl,
cpp_args : [blasr_warning_flags, '-DUSE_PBBAM=1', '-DCMAKE_BUILD=1'])
#########
# tests #
#########
if get_option('tests')
blasr_clang_formatter = find_program('tools/check-formatting')
test(
'blasr formatting check',
blasr_clang_formatter,
args : [
'--all'],
workdir : meson.source_root())
subdir('ctest')
endif