Skip to content

Commit accf9c7

Browse files
MillenniumFalconMechanicFran McDade
and
Fran McDade
authored
feat: updated AnVIL guides PFB text #4404 (#4412)
Co-authored-by: Fran McDade <[email protected]>
1 parent d1e31bd commit accf9c7

File tree

4 files changed

+30
-1
lines changed

4 files changed

+30
-1
lines changed

app/components/Layout/components/Content/content.styles.ts

+13
Original file line numberDiff line numberDiff line change
@@ -29,6 +29,19 @@ const muiAlert = (props: ThemeProps) => css`
2929
.MuiAlertTitle-root {
3030
${textHeadingSmall(props)};
3131
}
32+
33+
ol > li,
34+
ul > li {
35+
margin: 4px 0;
36+
37+
&:first-of-type {
38+
margin-top: 0;
39+
}
40+
41+
&:last-of-type {
42+
margin-bottom: 0;
43+
}
44+
}
3245
}
3346
}
3447
`;

app/content/anvil-cmg/guides.mdx

+17-1
Original file line numberDiff line numberDiff line change
@@ -77,7 +77,21 @@ When you click on a dataset, you’ll be taken a summary page where you can find
7777

7878
#### Exporting from The AnVIL Data Explorer
7979

80-
Once you’re ready to export the data, you can click Export to Terra from within a particular study, or you can also click the Export button at the top right of your screen when you are on the AnVIL Data Explorer’s main page.
80+
<Alert severity="info">
81+
<AlertTitle>Note</AlertTitle>
82+
<div>
83+
To export all data for the selected datasets, you must:
84+
85+
1. Choose only one or more “Dataset” filters.
86+
2. Select all organisms and file types available on the Analyze in Terra page.
87+
88+
Support for finer-grained export selections is being developed. Currently, finer-grained export selections may
89+
result in incomplete exports.
90+
91+
</div>
92+
</Alert>
93+
94+
Once you’re ready to export the data, you can click Export to Terra from within a particular dataset, or you can also select one or more datasets from the "Datasets" filter and click the Export button at the top right of your screen when you are on the AnVIL Data Explorer’s main page.
8195

8296
<Figure alt="Exporting with Terra" src="/guides/exporting-with-terra.png" />
8397

@@ -87,6 +101,8 @@ Clicking this button will take you to a window where you can export to a Terra w
87101

88102
Once you select Analyze in Terra, you’ll see a button labeled “Request Link”.
89103

104+
_Note, for full export, be sure to select all species and file types._
105+
90106
<Figure alt="Export to Terra Process" src="/guides/export-to-terra1.png" />
91107

92108
After you click this button, you will be prompted to wait while the system generates a link to Terra. Once this link is ready, you’ll see a page with a button labeled “Open Terra”. Clicking this button will take you to a workspace selection screen in Terra, where you’ll be able to select the workspace to which you’d like to add this data.

public/guides/export-to-terra1.png

-1.51 MB
Loading
-2.14 MB
Loading

0 commit comments

Comments
 (0)