forked from SPARCED/SPARCED
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathenvironment.yml
215 lines (215 loc) · 6.25 KB
/
environment.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
name: sparced
channels:
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=5.1=1_gnu
- alabaster=0.7.12=pyhd3eb1b0_0
- babel=2.11.0=py312h06a4308_0
- blas=1.0=mkl
- bottleneck=1.3.7=py312ha883a20_0
- brotli=1.0.9=h5eee18b_7
- brotli-bin=1.0.9=h5eee18b_7
- brotli-python=1.0.9=py312h6a678d5_7
- bzip2=1.0.8=h5eee18b_5
- ca-certificates=2024.3.11=h06a4308_0
- certifi=2024.2.2=py312h06a4308_0
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- colorama=0.4.6=py312h06a4308_0
- contourpy=1.2.0=py312hdb19cb5_0
- cycler=0.11.0=pyhd3eb1b0_0
- cyrus-sasl=2.1.28=h52b45da_1
- dbus=1.13.18=hb2f20db_0
- docutils=0.18.1=py312h06a4308_3
- expat=2.5.0=h6a678d5_0
- fontconfig=2.14.1=h4c34cd2_2
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.12.1=h4a9f257_0
- glib=2.78.4=h6a678d5_0
- glib-tools=2.78.4=h6a678d5_0
- gst-plugins-base=1.14.1=h6a678d5_1
- gstreamer=1.14.1=h5eee18b_1
- icu=73.1=h6a678d5_0
- idna=3.4=py312h06a4308_0
- imagesize=1.4.1=py312h06a4308_0
- intel-openmp=2023.1.0=hdb19cb5_46306
- jinja2=3.1.3=py312h06a4308_0
- jpeg=9e=h5eee18b_1
- kiwisolver=1.4.4=py312h6a678d5_0
- krb5=1.20.1=h143b758_1
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.38=h1181459_1
- lerc=3.0=h295c915_0
- libbrotlicommon=1.0.9=h5eee18b_7
- libbrotlidec=1.0.9=h5eee18b_7
- libbrotlienc=1.0.9=h5eee18b_7
- libclang=14.0.6=default_hc6dbbc7_1
- libclang13=14.0.6=default_he11475f_1
- libcups=2.4.2=h2d74bed_1
- libdeflate=1.17=h5eee18b_1
- libedit=3.1.20230828=h5eee18b_0
- libffi=3.4.4=h6a678d5_0
- libgcc-ng=11.2.0=h1234567_1
- libgfortran-ng=11.2.0=h00389a5_1
- libgfortran5=11.2.0=h1234567_1
- libglib=2.78.4=hdc74915_0
- libgomp=11.2.0=h1234567_1
- libiconv=1.16=h7f8727e_2
- libllvm14=14.0.6=hdb19cb5_3
- libpng=1.6.39=h5eee18b_0
- libpq=12.17=hdbd6064_0
- libstdcxx-ng=11.2.0=h1234567_1
- libtiff=4.5.1=h6a678d5_0
- libuuid=1.41.5=h5eee18b_0
- libwebp-base=1.3.2=h5eee18b_0
- libxcb=1.15=h7f8727e_0
- libxkbcommon=1.0.1=h5eee18b_1
- libxml2=2.10.4=hf1b16e4_1
- lz4-c=1.9.4=h6a678d5_0
- markupsafe=2.1.3=py312h5eee18b_0
- matplotlib=3.8.0=py312h06a4308_0
- matplotlib-base=3.8.0=py312h526ad5a_0
- mkl=2023.1.0=h213fc3f_46344
- mkl-service=2.4.0=py312h5eee18b_1
- mkl_fft=1.3.8=py312h5eee18b_0
- mkl_random=1.2.4=py312hdb19cb5_0
- munkres=1.1.4=py_0
- mysql=5.7.24=h721c034_2
- ncurses=6.4=h6a678d5_0
- numexpr=2.8.7=py312hf827012_0
- numpy=1.26.4=py312hc5e2394_0
- numpy-base=1.26.4=py312h0da6c21_0
- openjpeg=2.4.0=h3ad879b_0
- openssl=3.0.13=h7f8727e_1
- packaging=23.2=py312h06a4308_0
- pandas=2.2.1=py312h526ad5a_0
- pcre2=10.42=hebb0a14_0
- pillow=10.2.0=py312h5eee18b_0
- pip=23.3.1=py312h06a4308_0
- ply=3.11=py312h06a4308_1
- pygments=2.15.1=py312h06a4308_1
- pyparsing=3.0.9=py312h06a4308_0
- pyqt=5.15.10=py312h6a678d5_0
- pyqt5-sip=12.13.0=py312h5eee18b_0
- pysocks=1.7.1=py312h06a4308_0
- python=3.12.2=h996f2a0_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-tzdata=2023.3=pyhd3eb1b0_0
- pytz=2023.3.post1=py312h06a4308_0
- pyyaml=6.0.1=py312h5eee18b_0
- qt-main=5.15.2=h53bd1ea_10
- readline=8.2=h5eee18b_0
- requests=2.31.0=py312h06a4308_1
- scipy=1.12.0=py312hc5e2394_0
- setuptools=68.2.2=py312h06a4308_0
- sip=6.7.12=py312h6a678d5_0
- six=1.16.0=pyhd3eb1b0_1
- snowballstemmer=2.2.0=pyhd3eb1b0_0
- sphinxcontrib-applehelp=1.0.2=pyhd3eb1b0_0
- sphinxcontrib-devhelp=1.0.2=pyhd3eb1b0_0
- sphinxcontrib-htmlhelp=2.0.0=pyhd3eb1b0_0
- sphinxcontrib-jsmath=1.0.1=pyhd3eb1b0_0
- sphinxcontrib-qthelp=1.0.3=pyhd3eb1b0_0
- sqlite=3.41.2=h5eee18b_0
- tbb=2021.8.0=hdb19cb5_0
- tk=8.6.12=h1ccaba5_0
- tornado=6.3.3=py312h5eee18b_0
- tzdata=2024a=h04d1e81_0
- urllib3=2.1.0=py312h06a4308_1
- wheel=0.41.2=py312h06a4308_0
- xz=5.4.6=h5eee18b_0
- yaml=0.2.5=h7b6447c_0
- zlib=1.2.13=h5eee18b_0
- zstd=1.5.5=hc292b87_0
- pip:
- amici==0.11.12
- antimony==2.12.0.1
- anyio==4.3.0
- argon2-cffi==23.1.0
- argon2-cffi-bindings==21.2.0
- arrow==1.3.0
- asttokens==2.4.1
- async-lru==2.0.4
- attrs==23.2.0
- beautifulsoup4==4.12.3
- bleach==6.1.0
- cffi==1.16.0
- comm==0.2.2
- debugpy==1.8.1
- decorator==5.1.1
- defusedxml==0.7.1
- executing==2.0.1
- fastjsonschema==2.19.1
- fqdn==1.5.1
- h11==0.14.0
- h5py==3.11.0
- httpcore==1.0.5
- httpx==0.27.0
- ipykernel==6.29.4
- ipython==8.23.0
- isoduration==20.11.0
- jedi==0.19.1
- json5==0.9.25
- jsonpointer==2.4
- jsonschema==4.21.1
- jsonschema-specifications==2023.12.1
- jupyter-client==8.6.1
- jupyter-core==5.7.2
- jupyter-events==0.10.0
- jupyter-lsp==2.2.5
- jupyter-server==2.14.0
- jupyter-server-terminals==0.5.3
- jupyterlab==4.1.6
- jupyterlab-pygments==0.3.0
- jupyterlab-server==2.26.0
- markdown-it-py==3.0.0
- matplotlib-inline==0.1.7
- mdit-py-plugins==0.4.0
- mdurl==0.1.2
- mistune==3.0.2
- mpmath==1.3.0
- myst-parser==2.0.0
- nbclient==0.10.0
- nbconvert==7.16.3
- nbformat==5.10.4
- nest-asyncio==1.6.0
- notebook==7.1.3
- notebook-shim==0.2.4
- overrides==7.7.0
- pandocfilters==1.5.1
- parso==0.8.4
- pexpect==4.9.0
- pkgconfig==1.5.5
- platformdirs==4.2.0
- prometheus-client==0.20.0
- prompt-toolkit==3.0.43
- psutil==5.9.8
- ptyprocess==0.7.0
- pure-eval==0.2.2
- pycparser==2.22
- python-json-logger==2.0.7
- python-libsbml==5.18.0
- pyzmq==26.0.0
- referencing==0.34.0
- rfc3339-validator==0.1.4
- rfc3986-validator==0.1.1
- rpds-py==0.18.0
- send2trash==1.8.3
- sniffio==1.3.1
- soupsieve==2.5
- sphinx==7.2.6
- sphinx-pdj-theme==0.4.0
- sphinxcontrib-serializinghtml==1.1.10
- stack-data==0.6.3
- sympy==1.12
- terminado==0.18.1
- tinycss2==1.2.1
- toposort==1.10
- traitlets==5.14.2
- types-python-dateutil==2.9.0.20240316
- uri-template==1.3.0
- wcwidth==0.2.13
- webcolors==1.13
- webencodings==0.5.1
- websocket-client==1.7.0
- wurlitzer==3.0.3