Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

How to obtain reaction score from gene expression value? #18

Open
Alvis-Jiang opened this issue May 25, 2023 · 0 comments
Open

How to obtain reaction score from gene expression value? #18

Alvis-Jiang opened this issue May 25, 2023 · 0 comments

Comments

@Alvis-Jiang
Copy link

Hi,

I am currently using the iMAT of troppo to build a tissue-specific GEM, but I am not clear on how to obtain the reaction scores from gene expression value as the input of iMAT, like the 'grade2_calls.csv'. I am wondering if you can provide me with some detailed scripts about such procedures

Thank you so much
Boyu
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@Alvis-Jiang