diff --git a/README.md b/README.md index 47972202..e048ea98 100644 --- a/README.md +++ b/README.md @@ -111,6 +111,10 @@ docker pull biosystemsum/deepmol If you’d like to use the GPU, make sure to install the versions of TensorFlow and DGL that match the CUDA drivers for your hardware. +Do not install JAX, it will result dependency conflicts. + +Loading tensorflow models will be problematic for MacOS users due to a known tensorflow issue [46](https://github.com/keras-team/tf-keras/issues/46). + ## Getting Started diff --git a/README_pypi.md b/README_pypi.md index 657e8c4a..2983a68d 100644 --- a/README_pypi.md +++ b/README_pypi.md @@ -84,6 +84,9 @@ docker pull biosystemsum/deepmol If you’d like to use the GPU, make sure to install the versions of TensorFlow and DGL that match the CUDA drivers for your hardware. +Do not install JAX, it will result dependency conflicts. + +Loading tensorflow models will be problematic for MacOS users due to a known tensorflow issue [46](https://github.com/keras-team/tf-keras/issues/46). ## Getting Started diff --git a/docs/deepmol_docs/installation.md b/docs/deepmol_docs/installation.md index 98fb1b77..0c175a2d 100644 --- a/docs/deepmol_docs/installation.md +++ b/docs/deepmol_docs/installation.md @@ -63,4 +63,8 @@ docker pull biosystemsum/deepmol ### Disclaimer -If you’d like to use the GPU, make sure to install the versions of TensorFlow and DGL that match the CUDA drivers for your hardware. \ No newline at end of file +If you’d like to use the GPU, make sure to install the versions of TensorFlow and DGL that match the CUDA drivers for your hardware. + +Do not install JAX, it will result dependency conflicts. + +Loading tensorflow models will be problematic for MacOS users due to a known tensorflow issue [46](https://github.com/keras-team/tf-keras/issues/46). \ No newline at end of file diff --git a/extra-requirements.txt b/extra-requirements.txt index 3270cae8..5f25611e 100644 --- a/extra-requirements.txt +++ b/extra-requirements.txt @@ -8,7 +8,6 @@ cached_property==1.5.2: preprocessing, deep-learning, machine-learning, test numpy==1.23.5: preprocessing, deep-learning, machine-learning, test dill==0.3.6: preprocessing, deep-learning, machine-learning, test shap==0.44.0: deep-learning, machine-learning -gensim==4.2.0: preprocessing, deep-learning, machine-learning IPython: preprocessing, deep-learning, machine-learning imblearn: preprocessing, machine-learning, deep-learning umap-learn==0.5.1: machine-learning, deep-learning diff --git a/setup.cfg b/setup.cfg index cccc3114..304df78e 100644 --- a/setup.cfg +++ b/setup.cfg @@ -1,6 +1,6 @@ [metadata] name = deepmol -version = 1.1.7 +version = 1.1.8 description = DeepMol: a python-based machine and deep learning framework for drug discovery keywords = machine-learning, deep-learning, cheminformatics, drug-discovery author = DeepMol Team diff --git a/src/deepmol/__init__.py b/src/deepmol/__init__.py index e6a1371f..61ceaad7 100644 --- a/src/deepmol/__init__.py +++ b/src/deepmol/__init__.py @@ -1,2 +1,2 @@ -__version__ = '1.1.7' +__version__ = '1.1.8'