Failure to load models in moose-examples [docker] #247
Description
My environment is bhallalab/moose docker.
Using moosegui when I try to load moose-examples I fail to load any of the models shown in the documentation.
When I follow the instruction
Cerebellar granule cell
File -> Load -> ~/moose/moose-examples/neuroml/GranuleCell/GranuleCell.net.xml
This is a single compartment Cerebellar granule cell with a variety of channels Maex, R. and De Schutter, E., 1997 (exported from http://www.neuroconstruct.org/). Click on its soma, and See children for its list of channels. Vary the Gbar of these channels to obtain regular firing, adapting and bursty behaviour (may need to increase tau of the Ca pool).
I get
For
Pyloric rhythm generator in the stomatogastric ganglion of lobster
File -> Load -> ~/moose/moose-examples/neuroml/pyloric/Generated.net.xml
I get
For
Purkinje cell
File -> Load -> ~/moose/moose-examples/neuroml/PurkinjeCell/Purkinje.net.xml
This is a purely passive cell, but with extensive morphology [De Schutter, E. and Bower, J. M., 1994] (exported from http://www.neuroconstruct.org/). The channel specifications are in an obsolete ChannelML format which MOOSE does not support.
I get
For
Olfactory bulb subnetwork
File -> Load -> ~/moose/moose-examples/neuroml/OlfactoryBulb/numgloms2_seed100.0_decimated.xml
This is a pruned and decimated version of a detailed network model of the Olfactory bulb [Gilra A. and Bhalla U., in preparation] without channels and synaptic connections. We hope to post the ChannelML specifications of the channels and synapses soon.
I get
For
All channels cell
File -> Load -> ~/moose/moose-examples/neuroml/allChannelsCell/allChannelsCell.net.xml
This is the Cerebellar granule cell as above, but with loads of channels from various cell types (exported from http://www.neuroconstruct.org/). Play around with the channel properties to see what they do. You can also edit the ChannelML files in ~/moose/moose-examples/neuroml/allChannelsCell/cells_channels/ to experiment further.
I get
